A data package containing annotation data for JazaeriMetaData


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Documentation for package ‘JazaeriMetaData.db’ version 2.4.1

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JazaeriMetaData Bioconductor annotation data package
JazaeriMetaData.db Bioconductor annotation data package
JazaeriMetaDataACCNUM Map Manufacturer identifiers to Accession Numbers
JazaeriMetaDataALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
JazaeriMetaDataCHR Map Manufacturer IDs to Chromosomes
JazaeriMetaDataCHRLENGTHS A named vector for the length of each of the chromosomes
JazaeriMetaDataCHRLOC Map Manufacturer IDs to Chromosomal Location
JazaeriMetaDataCHRLOCEND Map Manufacturer IDs to Chromosomal Location
JazaeriMetaDataENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
JazaeriMetaDataENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
JazaeriMetaDataENTREZID Map between Manufacturer Identifiers and Entrez Gene
JazaeriMetaDataENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
JazaeriMetaDataENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
JazaeriMetaDataGENENAME Map between Manufacturer IDs and Genes
JazaeriMetaDataGO Map between Manufacturer IDs and Gene Ontology (GO)
JazaeriMetaDataGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
JazaeriMetaDataGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
JazaeriMetaDataLOCUSID Map between Manufacturer Identifiers and Entrez Gene
JazaeriMetaDataMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
JazaeriMetaDataMAPCOUNTS Number of mapped keys for the maps in package JazaeriMetaData.db
JazaeriMetaDataOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
JazaeriMetaDataORGANISM The Organism information for JazaeriMetaData
JazaeriMetaDataORGPKG The Organism information for JazaeriMetaData
JazaeriMetaDataPATH Mappings between probe identifiers and KEGG pathway identifiers
JazaeriMetaDataPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
JazaeriMetaDataPFAM Map Manufacturer IDs to Pfam IDs
JazaeriMetaDataPMID Map between Manufacturer Identifiers and PubMed Identifiers
JazaeriMetaDataPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
JazaeriMetaDataPROSITE Map Manufacturer IDs to PROSITE ID
JazaeriMetaDataREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
JazaeriMetaDataSYMBOL Map between Manufacturer Identifiers and Gene Symbols
JazaeriMetaDataUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
JazaeriMetaDataUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
JazaeriMetaDataUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
JazaeriMetaData_dbconn Collect information about the package annotation DB
JazaeriMetaData_dbfile Collect information about the package annotation DB
JazaeriMetaData_dbInfo Collect information about the package annotation DB
JazaeriMetaData_dbschema Collect information about the package annotation DB